Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 BAP1-211ENST00000615113 489 ntBASIC11.62□□□□□ -0.55
SRRM4A7MD48 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 CICP17-201ENST00000418553 2377 ntBASIC11.62□□□□□ -0.55
SRRM4A7MD48 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
SRRM4A7MD48 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SRRM4A7MD48 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 AL365181.3-201ENST00000605886 3222 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 AC079776.1-201ENST00000401540 1152 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 U91328.1-201ENST00000437528 223 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 GAPDHP21-201ENST00000450301 1010 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 SNX29P1-201ENST00000548357 1007 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 Z98259.2-201ENST00000641583 609 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 PTENP1-202ENST00000532280 3996 ntBASIC11.61□□□□□ -0.55
SRRM4A7MD48 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SRRM4A7MD48 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SRRM4A7MD48 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.6□□□□□ -0.55
SRRM4A7MD48 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.6□□□□□ -0.55
SRRM4A7MD48 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.6□□□□□ -0.55
SRRM4A7MD48 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.6□□□□□ -0.55
SRRM4A7MD48 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.6□□□□□ -0.55
SRRM4A7MD48 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SRRM4A7MD48 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms