Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 ISCA2P1-201ENST00000425548 448 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC134698.3-201ENST00000523880 214 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC016629.1-201ENST00000596579 586 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AL353770.1-201ENST00000614915 403 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC006486.2-201ENST00000624246 2199 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 AC144522.1-201ENST00000625111 1658 ntBASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TSSC4Q9Y5U2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 LINC01101-201ENST00000622953 1884 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AC239868.1-201ENST00000369385 493 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AL596276.2-201ENST00000447525 331 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AC006122.1-201ENST00000493323 440 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 MIR3907-201ENST00000579424 151 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 RN7SL574P-201ENST00000581512 297 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TSSC4Q9Y5U2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms