Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 RNA5SP417-201ENST00000516459 108 ntBASIC16.8■□□□□ 0.28
EFCC1Q9HA90 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.8■□□□□ 0.28
EFCC1Q9HA90 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 MME-218ENST00000625667 363 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 MROH4P-201ENST00000431302 1578 ntBASIC16.8■□□□□ 0.28
EFCC1Q9HA90 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AC136621.1-201ENST00000624017 2304 ntBASIC16.79■□□□□ 0.28
EFCC1Q9HA90 MRPL37P1-201ENST00000592451 1337 ntBASIC16.79■□□□□ 0.28
EFCC1Q9HA90 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AC138701.2-201ENST00000553634 226 ntBASIC16.79■□□□□ 0.28
EFCC1Q9HA90 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PEBP1P2-201ENST00000603980 558 ntBASIC16.79■□□□□ 0.28
EFCC1Q9HA90 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EFCC1Q9HA90 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AC118758.2-201ENST00000614242 2813 ntBASIC16.78■□□□□ 0.28
EFCC1Q9HA90 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AL357373.1-201ENST00000394974 322 ntBASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 DUX4L50-201ENST00000455245 715 ntBASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCC1Q9HA90 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms