Protein–RNA interactions for Protein: Q9BVW6

SMIM2, Small integral membrane protein 2, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM2Q9BVW6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM2Q9BVW6 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SMIM2Q9BVW6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM2Q9BVW6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM2Q9BVW6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM2Q9BVW6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.4□□□□□ -0.75
SMIM2Q9BVW6 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AL590440.2-201ENST00000641973 1595 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 RNU1-114P-201ENST00000365297 166 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 VDAC1P7-201ENST00000462417 847 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 FAM86LP-201ENST00000478302 853 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 RPL13AP25-201ENST00000484130 612 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ZNF890P-202ENST00000530367 1156 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 AC010970.1-201ENST00000445125 1848 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PCDHA6-201ENST00000378126 3267 ntBASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM2Q9BVW6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM2Q9BVW6 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms