Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC007389.4-201ENST00000454674 793 ntBASIC13.24□□□□□ -0.29
SNX18Q96RF0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 AC215219.1-201ENST00000400706 1817 ntBASIC13.24□□□□□ -0.29
SNX18Q96RF0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 RN7SL832P-201ENST00000607781 1756 ntBASIC13.24□□□□□ -0.29
SNX18Q96RF0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TRIM80P-201ENST00000455685 2848 ntBASIC13.24□□□□□ -0.29
SNX18Q96RF0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 PCDHB18P-202ENST00000526308 3197 ntBASIC13.24□□□□□ -0.29
SNX18Q96RF0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SNX18Q96RF0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNX18Q96RF0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC016397.2-201ENST00000624848 1985 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC079776.1-201ENST00000401540 1152 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 POM121L8P-201ENST00000417732 1281 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC234783.1-201ENST00000441761 496 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 POM121L9P-203ENST00000441984 1285 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC004466.1-201ENST00000599515 1080 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.23□□□□□ -0.29
SNX18Q96RF0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNX18Q96RF0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.23□□□□□ -0.29
SNX18Q96RF0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms