Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 AC008622.3-201ENST00000621170 600 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 HLA-W-207ENST00000439514 771 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RN7SL22P-201ENST00000471800 269 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RN7SL838P-201ENST00000481676 295 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 ALG10-202ENST00000538927 571 ntTSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 AL139317.2-201ENST00000556998 158 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 RPSAP61-201ENST00000412542 878 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 OR4A49P-201ENST00000527050 632 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 TCAF2P1-201ENST00000291129 2421 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AC105443.1-201ENST00000433754 712 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AC104115.1-201ENST00000484005 623 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AC104117.4-201ENST00000521486 847 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 ACTG1P23-201ENST00000437653 1074 ntBASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALMS1Q8TCU4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC000078.1-201ENST00000420617 682 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HNRNPA1P11-201ENST00000580106 956 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 MIR5193-201ENST00000584510 109 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms