Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 MARK2P5-201ENST00000507649 634 ntBASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CHMP4BP1-201ENST00000556017 588 ntBASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AC105129.2-201ENST00000559536 390 ntBASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AL008718.2-201ENST00000609206 1313 ntBASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLDND2Q8NHS1 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC008132.1-202ENST00000342005 1389 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ACTG1P2-201ENST00000415776 1125 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ACTG1P11-201ENST00000425411 1125 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 KLF2P1-201ENST00000447438 1042 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ALG3P1-201ENST00000508806 1114 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC008805.1-201ENST00000590892 364 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 AC097724.1-201ENST00000609581 426 ntBASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLDND2Q8NHS1 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms