Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 U3.5-201ENST00000363448 216 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 GULOP-201ENST00000454030 748 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 BAK1P2-201ENST00000532665 631 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 EIF5AP2-201ENST00000585668 1047 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 AL139339.2-201ENST00000608063 657 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 Z98885.3-201ENST00000624882 1757 ntBASIC18.78■□□□□ 0.6
USP31Q70CQ4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.78■□□□□ 0.6
USP31Q70CQ4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP31Q70CQ4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 BX640514.1-201ENST00000583223 1918 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AL080243.1-201ENST00000423293 1060 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AL929302.1-201ENST00000426556 871 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 AC079250.1-201ENST00000456046 531 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 FAM86KP-201ENST00000509817 987 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.77■□□□□ 0.6
USP31Q70CQ4 TYMSP2-201ENST00000589501 424 ntBASIC18.77■□□□□ 0.6
USP31Q70CQ4 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP31Q70CQ4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.77■□□□□ 0.59
USP31Q70CQ4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP31Q70CQ4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP31Q70CQ4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP31Q70CQ4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP31Q70CQ4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AC093462.1-201ENST00000621167 1683 ntBASIC18.76■□□□□ 0.59
USP31Q70CQ4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 ZNF877P-201ENST00000437614 612 ntBASIC18.76■□□□□ 0.59
USP31Q70CQ4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 NRADDP-202ENST00000641269 1585 ntBASIC18.76■□□□□ 0.59
USP31Q70CQ4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP31Q70CQ4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.76■□□□□ 0.59
USP31Q70CQ4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms