Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTR9Q6PD62 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
CTR9Q6PD62 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.09■□□□□ 0.33
CTR9Q6PD62 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 AC234782.1-201ENST00000451950 919 ntBASIC17.09■□□□□ 0.33
CTR9Q6PD62 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 AC016629.1-201ENST00000596579 586 ntBASIC17.09■□□□□ 0.33
CTR9Q6PD62 AC007718.1-201ENST00000621078 280 ntBASIC17.09■□□□□ 0.33
CTR9Q6PD62 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTR9Q6PD62 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTR9Q6PD62 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CTR9Q6PD62 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTR9Q6PD62 CCT8L1P-201ENST00000465400 1674 ntBASIC17.08■□□□□ 0.32
CTR9Q6PD62 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 AC008723.1-201ENST00000506922 207 ntBASIC17.08■□□□□ 0.32
CTR9Q6PD62 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 AC079328.1-201ENST00000560358 952 ntBASIC17.08■□□□□ 0.32
CTR9Q6PD62 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 AC084346.2-201ENST00000607097 949 ntBASIC17.08■□□□□ 0.32
CTR9Q6PD62 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTR9Q6PD62 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 BX640514.1-201ENST00000583223 1918 ntBASIC17.08■□□□□ 0.32
CTR9Q6PD62 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CTR9Q6PD62 BRD7P5-201ENST00000299197 1822 ntBASIC17.07■□□□□ 0.32
CTR9Q6PD62 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTR9Q6PD62 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTR9Q6PD62 CR383656.2-201ENST00000548656 2254 ntBASIC17.07■□□□□ 0.32
CTR9Q6PD62 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTR9Q6PD62 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTR9Q6PD62 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTR9Q6PD62 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms