Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DUX4L33-201ENST00000635217 958 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.71□□□□□ -0.22
RIF1Q5UIP0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RIF1Q5UIP0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 PLAC9P1-203ENST00000440031 223 ntBASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 TUBB8P9-201ENST00000422534 1276 ntBASIC13.7□□□□□ -0.22
RIF1Q5UIP0 ALMS1P1-201ENST00000428767 921 ntBASIC13.7□□□□□ -0.22
RIF1Q5UIP0 TUBB8P10-201ENST00000430210 1279 ntBASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIF1Q5UIP0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 Z84721.1-201ENST00000438841 372 ntBASIC13.69□□□□□ -0.22
RIF1Q5UIP0 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 MIR5091-201ENST00000578707 93 ntBASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms