Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 AL008718.2-201ENST00000609206 1313 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 SHC1P1-201ENST00000425230 1745 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 ST20-AS1-201ENST00000560255 4223 ntBASIC12.84□□□□□ -0.35
EFNB1P98172 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 AC020917.4-201ENST00000623994 1999 ntBASIC12.84□□□□□ -0.35
EFNB1P98172 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 WASH4P-201ENST00000564273 1246 ntBASIC12.84□□□□□ -0.35
EFNB1P98172 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNB1P98172 AC004233.3-201ENST00000607794 1269 ntBASIC12.84□□□□□ -0.35
EFNB1P98172 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
EFNB1P98172 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 AC060814.4-201ENST00000594169 2163 ntBASIC12.84□□□□□ -0.35
EFNB1P98172 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNB1P98172 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNB1P98172 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNB1P98172 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
EFNB1P98172 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
EFNB1P98172 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
EFNB1P98172 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
EFNB1P98172 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
EFNB1P98172 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
EFNB1P98172 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
EFNB1P98172 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.83□□□□□ -0.35
EFNB1P98172 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNB1P98172 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNB1P98172 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 AC073862.5-201ENST00000624129 2027 ntBASIC12.83□□□□□ -0.36
EFNB1P98172 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB1P98172 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms