Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 DPM3-202ENST00000368399 517 ntBASIC13.48□□□□□ -0.25
PER3P56645 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 EIF3FP3-201ENST00000434851 1086 ntBASIC13.48□□□□□ -0.25
PER3P56645 NOC2LP1-201ENST00000450578 752 ntBASIC13.48□□□□□ -0.25
PER3P56645 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 AC090857.1-201ENST00000527400 390 ntBASIC13.48□□□□□ -0.25
PER3P56645 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.48□□□□□ -0.25
PER3P56645 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 PGAM1P5-201ENST00000548011 764 ntBASIC13.48□□□□□ -0.25
PER3P56645 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.48□□□□□ -0.25
PER3P56645 RN7SL574P-201ENST00000581512 297 ntBASIC13.48□□□□□ -0.25
PER3P56645 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.48□□□□□ -0.25
PER3P56645 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 AC004923.1-202ENST00000642106 209 ntBASIC13.48□□□□□ -0.25
PER3P56645 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
PER3P56645 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 AL157791.1-201ENST00000553667 1699 ntBASIC13.47□□□□□ -0.25
PER3P56645 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
PER3P56645 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.47□□□□□ -0.25
PER3P56645 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.47□□□□□ -0.25
PER3P56645 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.47□□□□□ -0.25
PER3P56645 AL391280.1-201ENST00000506969 1062 ntBASIC13.47□□□□□ -0.25
PER3P56645 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.47□□□□□ -0.25
PER3P56645 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PER3P56645 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PER3P56645 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.47□□□□□ -0.25
PER3P56645 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PER3P56645 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms