Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 HSPA7-201ENST00000445535 1927 ntBASIC14.68□□□□□ -0.06
CDH4P55283 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH4P55283 AC103592.1-201ENST00000394513 664 ntBASIC14.68□□□□□ -0.06
CDH4P55283 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH4P55283 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 UPF3AP2-201ENST00000457924 1132 ntBASIC14.68□□□□□ -0.06
CDH4P55283 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH4P55283 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH4P55283 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH4P55283 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH4P55283 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH4P55283 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH4P55283 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH4P55283 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CDH4P55283 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH4P55283 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH4P55283 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 AC016397.2-201ENST00000624848 1985 ntBASIC14.67□□□□□ -0.06
CDH4P55283 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 KRT17P5-201ENST00000332088 839 ntBASIC14.67□□□□□ -0.06
CDH4P55283 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH4P55283 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH4P55283 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH4P55283 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 RPSAP15-201ENST00000448168 861 ntBASIC14.67□□□□□ -0.06
CDH4P55283 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 FGFR3P5-201ENST00000564496 886 ntBASIC14.67□□□□□ -0.06
CDH4P55283 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 AC012044.1-201ENST00000603431 297 ntBASIC14.67□□□□□ -0.06
CDH4P55283 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 FAM90A2P-201ENST00000511144 1395 ntBASIC14.67□□□□□ -0.06
CDH4P55283 FAM90A25P-201ENST00000528404 1395 ntBASIC14.67□□□□□ -0.06
CDH4P55283 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms