Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC6A12P48065 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 AL132994.2-201ENST00000603120 687 ntBASIC13.86□□□□□ -0.19
SLC6A12P48065 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 LINC00115-201ENST00000473798 1317 ntBASIC13.86□□□□□ -0.19
SLC6A12P48065 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC6A12P48065 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC015909.5-201ENST00000624336 2266 ntBASIC13.85□□□□□ -0.19
SLC6A12P48065 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC067750.1-201ENST00000608826 6545 ntBASIC13.85□□□□□ -0.19
SLC6A12P48065 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC6A12P48065 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC6A12P48065 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC6A12P48065 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC6A12P48065 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC6A12P48065 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC6A12P48065 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC6A12P48065 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 LINC01815-202ENST00000641468 1409 ntBASIC13.84□□□□□ -0.19
SLC6A12P48065 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC6A12P48065 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.84□□□□□ -0.19
SLC6A12P48065 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC6A12P48065 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC6A12P48065 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC6A12P48065 RPS2P32-201ENST00000439199 892 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms