Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
USP8P40818 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
USP8P40818 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
USP8P40818 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.84■□□□□ 0.13
USP8P40818 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.84■□□□□ 0.13
USP8P40818 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
USP8P40818 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
USP8P40818 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.83■□□□□ 0.13
USP8P40818 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
USP8P40818 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
USP8P40818 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
USP8P40818 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.83■□□□□ 0.13
USP8P40818 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
USP8P40818 AC139712.1-201ENST00000378256 1875 ntBASIC15.83■□□□□ 0.12
USP8P40818 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.83■□□□□ 0.12
USP8P40818 AC004945.1-201ENST00000416738 983 ntBASIC15.83■□□□□ 0.12
USP8P40818 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 AP003171.2-201ENST00000528208 925 ntBASIC15.83■□□□□ 0.12
USP8P40818 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.83■□□□□ 0.12
USP8P40818 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.83■□□□□ 0.12
USP8P40818 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 BX088702.1-201ENST00000610784 235 ntBASIC15.83■□□□□ 0.12
USP8P40818 AC006453.4-201ENST00000636949 1252 ntBASIC15.83■□□□□ 0.12
USP8P40818 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.83■□□□□ 0.12
USP8P40818 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.83■□□□□ 0.12
USP8P40818 KRT8P4-201ENST00000509735 1454 ntBASIC15.83■□□□□ 0.12
USP8P40818 MIR193BHG-211ENST00000641433 5365 ntBASIC15.83■□□□□ 0.12
USP8P40818 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
USP8P40818 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 CNN2P8-201ENST00000421872 913 ntBASIC15.82■□□□□ 0.12
USP8P40818 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 PUDPP3-201ENST00000445368 636 ntBASIC15.82■□□□□ 0.12
USP8P40818 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 AC103988.2-201ENST00000561804 725 ntBASIC15.82■□□□□ 0.12
USP8P40818 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
USP8P40818 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
USP8P40818 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 MEX3B-202ENST00000558133 4333 ntBASIC15.82■□□□□ 0.12
USP8P40818 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
USP8P40818 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms