Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 RN7SL602P-201ENST00000578326 324 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 MIR4254-201ENST00000581063 76 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 RN7SL718P-201ENST00000581254 303 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TM4SF1P30408 MIR8071-1-201ENST00000616769 65 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 MIR8071-2-201ENST00000616772 65 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TM4SF1P30408 RN7SL832P-201ENST00000607781 1756 ntBASIC17.47■□□□□ 0.39
TM4SF1P30408 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.47■□□□□ 0.39
TM4SF1P30408 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.47■□□□□ 0.39
TM4SF1P30408 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
TM4SF1P30408 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM4SF1P30408 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
TM4SF1P30408 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 U3.5-201ENST00000363448 216 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 SNORA57-201ENST00000383870 149 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 MIR1307-201ENST00000408840 149 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 AL137244.1-201ENST00000422931 865 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 AC136604.1-202ENST00000425471 771 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF1P30408 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF1P30408 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF1P30408 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF1P30408 NEK4P3-201ENST00000604859 544 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 AC090510.3-201ENST00000615831 821 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.46■□□□□ 0.39
TM4SF1P30408 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.46■□□□□ 0.39
TM4SF1P30408 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.46■□□□□ 0.39
TM4SF1P30408 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.46■□□□□ 0.39
TM4SF1P30408 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.46■□□□□ 0.39
TM4SF1P30408 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM4SF1P30408 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
TM4SF1P30408 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 PES1P2-201ENST00000449745 1735 ntBASIC17.45■□□□□ 0.38
TM4SF1P30408 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TM4SF1P30408 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TM4SF1P30408 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF1P30408 EEF1DP5-201ENST00000431410 772 ntBASIC17.45■□□□□ 0.38
TM4SF1P30408 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF1P30408 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 GULOP-201ENST00000454030 748 ntBASIC17.45■□□□□ 0.38
TM4SF1P30408 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.45■□□□□ 0.38
TM4SF1P30408 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF1P30408 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.45■□□□□ 0.38
TM4SF1P30408 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF1P30408 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.45■□□□□ 0.38
TM4SF1P30408 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.45■□□□□ 0.38
TM4SF1P30408 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TM4SF1P30408 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms