Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CD40P25942 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CD40P25942 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 KRT8P31-201ENST00000504812 1408 ntBASIC12.41□□□□□ -0.42
CD40P25942 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.41□□□□□ -0.42
CD40P25942 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 AC103691.2-201ENST00000618824 433 ntBASIC12.41□□□□□ -0.42
CD40P25942 AC051619.9-201ENST00000623237 597 ntBASIC12.41□□□□□ -0.42
CD40P25942 AL390755.1-201ENST00000623716 2027 ntBASIC12.41□□□□□ -0.42
CD40P25942 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.41□□□□□ -0.42
CD40P25942 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 AC090505.1-201ENST00000430515 1834 ntBASIC12.4□□□□□ -0.42
CD40P25942 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.4□□□□□ -0.42
CD40P25942 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CD40P25942 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 MIR557-201ENST00000385239 98 ntBASIC12.4□□□□□ -0.42
CD40P25942 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 AC026316.1-201ENST00000398900 414 ntBASIC12.4□□□□□ -0.42
CD40P25942 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
CD40P25942 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.4□□□□□ -0.42
CD40P25942 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.4□□□□□ -0.42
CD40P25942 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.4□□□□□ -0.42
CD40P25942 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.4□□□□□ -0.42
CD40P25942 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.4□□□□□ -0.42
CD40P25942 AC007326.1-201ENST00000604539 458 ntBASIC12.4□□□□□ -0.42
CD40P25942 AC103810.10-201ENST00000606504 343 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms