Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.52□□□□□ -0.25
NR4A1P22736 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NR4A1P22736 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NR4A1P22736 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NR4A1P22736 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A1P22736 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 AL121723.1-201ENST00000445194 1519 ntBASIC13.51□□□□□ -0.25
NR4A1P22736 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 CLK3P2-201ENST00000427566 1453 ntBASIC13.51□□□□□ -0.25
NR4A1P22736 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A1P22736 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.51□□□□□ -0.25
NR4A1P22736 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A1P22736 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.51□□□□□ -0.25
NR4A1P22736 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
NR4A1P22736 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NR4A1P22736 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 CICP1-201ENST00000416803 2410 ntBASIC13.51□□□□□ -0.25
NR4A1P22736 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 AL157996.1-201ENST00000624684 2299 ntBASIC13.51□□□□□ -0.25
NR4A1P22736 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A1P22736 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A1P22736 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NR4A1P22736 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.5□□□□□ -0.25
NR4A1P22736 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NR4A1P22736 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
NR4A1P22736 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.5□□□□□ -0.25
NR4A1P22736 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A1P22736 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 AP005018.1-201ENST00000525475 301 ntBASIC13.5□□□□□ -0.25
NR4A1P22736 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.5□□□□□ -0.25
NR4A1P22736 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms