Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 MST1P2-201ENST00000457982 2291 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 VDAC1P1-201ENST00000439229 848 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 RNMTL1P1-201ENST00000454103 560 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 RPL18P13-201ENST00000478088 569 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC022217.1-201ENST00000521069 738 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 FAM8A2P-201ENST00000528813 1142 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC104982.3-201ENST00000581995 514 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC008805.1-201ENST00000590892 364 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AL591471.1-201ENST00000621855 229 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC090386.2-201ENST00000623010 1039 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AC011474.4-201ENST00000623523 2076 ntBASIC14.57□□□□□ -0.08
HLA-DPA1P20036 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 KRT18P36-201ENST00000411618 1276 ntBASIC14.56□□□□□ -0.08
HLA-DPA1P20036 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 SCARNA21-201ENST00000517026 139 ntBASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PGAM1P5-201ENST00000548011 764 ntBASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC022748.3-201ENST00000621828 275 ntBASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms