Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHGAP10645 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.54■□□□□ 0.88
CHGAP10645 IGHV1-12-201ENST00000518307 205 ntBASIC20.54■□□□□ 0.88
CHGAP10645 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGAP10645 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGAP10645 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CHGAP10645 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHGAP10645 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGAP10645 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHGAP10645 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CHGAP10645 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.53■□□□□ 0.88
CHGAP10645 RN7SL788P-201ENST00000460504 316 ntBASIC20.53■□□□□ 0.88
CHGAP10645 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHGAP10645 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.53■□□□□ 0.88
CHGAP10645 RN7SL582P-201ENST00000491078 279 ntBASIC20.53■□□□□ 0.88
CHGAP10645 RN7SL767P-201ENST00000493013 295 ntBASIC20.53■□□□□ 0.88
CHGAP10645 FAM86KP-201ENST00000509817 987 ntBASIC20.53■□□□□ 0.88
CHGAP10645 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.53■□□□□ 0.88
CHGAP10645 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHGAP10645 AL118516.1-201ENST00000564152 670 ntBASIC20.53■□□□□ 0.88
CHGAP10645 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 AC010632.2-201ENST00000588369 1224 ntBASIC20.53■□□□□ 0.88
CHGAP10645 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.53■□□□□ 0.88
CHGAP10645 PEBP1P2-201ENST00000603980 558 ntBASIC20.53■□□□□ 0.88
CHGAP10645 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHGAP10645 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 KRT8P18-201ENST00000413425 1445 ntBASIC20.53■□□□□ 0.88
CHGAP10645 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHGAP10645 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHGAP10645 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHGAP10645 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 AC232323.1-201ENST00000540724 2099 ntBASIC20.52■□□□□ 0.88
CHGAP10645 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHGAP10645 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 COX20P1-201ENST00000366529 357 ntBASIC20.52■□□□□ 0.88
CHGAP10645 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 BX679664.3-201ENST00000414070 555 ntBASIC20.52■□□□□ 0.88
CHGAP10645 OR52M2P-201ENST00000414298 959 ntBASIC20.52■□□□□ 0.88
CHGAP10645 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGAP10645 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 AC113935.1-201ENST00000471722 555 ntBASIC20.52■□□□□ 0.88
CHGAP10645 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGAP10645 AP005264.5-201ENST00000590066 467 ntBASIC20.52■□□□□ 0.88
CHGAP10645 AL359091.4-201ENST00000610052 409 ntBASIC20.52■□□□□ 0.88
CHGAP10645 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGAP10645 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHGAP10645 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.52■□□□□ 0.88
CHGAP10645 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.52■□□□□ 0.87
CHGAP10645 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHGAP10645 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CHGAP10645 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CHGAP10645 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
CHGAP10645 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHGAP10645 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.52■□□□□ 0.87
CHGAP10645 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.52■□□□□ 0.87
CHGAP10645 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGAP10645 AL672207.1-201ENST00000328462 1570 ntBASIC20.51■□□□□ 0.87
CHGAP10645 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGAP10645 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGAP10645 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHGAP10645 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.51■□□□□ 0.87
CHGAP10645 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHGAP10645 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGAP10645 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.51■□□□□ 0.87
CHGAP10645 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.51■□□□□ 0.87
CHGAP10645 DDX39AP1-201ENST00000445147 1181 ntBASIC20.51■□□□□ 0.87
CHGAP10645 RN7SKP155-201ENST00000516031 288 ntBASIC20.51■□□□□ 0.87
CHGAP10645 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGAP10645 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHGAP10645 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGAP10645 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGAP10645 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms