Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 TADA2B-205ENST00000515646 3818 ntBASIC11.51□□□□□ -0.57
APOC3P02656 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 RBFOX1-224ENST00000641259 3651 ntBASIC11.51□□□□□ -0.57
APOC3P02656 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
APOC3P02656 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
APOC3P02656 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC3P02656 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
APOC3P02656 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC3P02656 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC3P02656 BNIP3P18-201ENST00000593976 575 ntBASIC11.51□□□□□ -0.57
APOC3P02656 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 FP325332.1-201ENST00000624818 2045 ntBASIC11.51□□□□□ -0.57
APOC3P02656 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 AC009549.1-201ENST00000603468 1686 ntBASIC11.51□□□□□ -0.57
APOC3P02656 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 AL360270.3-201ENST00000609118 1348 ntBASIC11.51□□□□□ -0.57
APOC3P02656 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC3P02656 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC3P02656 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC3P02656 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 AL157414.3-201ENST00000624276 1954 ntBASIC11.5□□□□□ -0.57
APOC3P02656 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms