Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 PRSS3P1-201ENST00000503996 742 ntBASIC17.7■□□□□ 0.42
CACNA1FO60840 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA1FO60840 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.7■□□□□ 0.42
CACNA1FO60840 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CACNA1FO60840 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA1FO60840 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNA1FO60840 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNA1FO60840 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNA1FO60840 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNA1FO60840 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNA1FO60840 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CACNA1FO60840 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNA1FO60840 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNA1FO60840 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA1FO60840 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA1FO60840 AC245140.2-201ENST00000624054 1939 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CACNA1FO60840 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CACNA1FO60840 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.68■□□□□ 0.42
CACNA1FO60840 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNA1FO60840 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNA1FO60840 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CACNA1FO60840 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CACNA1FO60840 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA1FO60840 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC17.68■□□□□ 0.42
CACNA1FO60840 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CACNA1FO60840 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNA1FO60840 AC008267.1-201ENST00000474858 1069 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 TRMT112P3-201ENST00000580149 358 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 RN7SL555P-201ENST00000584742 339 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA1FO60840 AC103810.10-201ENST00000606504 343 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 RN7SL736P-201ENST00000613111 269 ntBASIC17.68■□□□□ 0.42
CACNA1FO60840 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNA1FO60840 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA1FO60840 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA1FO60840 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CACNA1FO60840 ABCD1P4-201ENST00000399687 604 ntBASIC17.67■□□□□ 0.42
CACNA1FO60840 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNA1FO60840 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.67■□□□□ 0.42
CACNA1FO60840 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1FO60840 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNA1FO60840 BEND3P1-201ENST00000421591 1944 ntBASIC17.67■□□□□ 0.42
CACNA1FO60840 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA1FO60840 AC135782.3-201ENST00000562782 2105 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms