Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.32■□□□□ 0.04
CAPN9O14815 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CAPN9O14815 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN9O14815 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN9O14815 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN9O14815 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN9O14815 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN9O14815 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN9O14815 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN9O14815 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN9O14815 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN9O14815 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 BX640514.1-201ENST00000583223 1918 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 DMBT1P1-203ENST00000636837 4628 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.31■□□□□ 0.04
CAPN9O14815 AL157407.1-201ENST00000435784 904 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 AC108725.1-201ENST00000495472 409 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.31■□□□□ 0.04
CAPN9O14815 AC027237.1-201ENST00000560942 655 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 AL118558.3-201ENST00000607414 1079 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 MIR6074-201ENST00000612054 107 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 AC015802.1-201ENST00000588104 1449 ntBASIC15.31■□□□□ 0.04
CAPN9O14815 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN9O14815 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN9O14815 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CAPN9O14815 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 AC126335.2-201ENST00000623362 4637 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CAPN9O14815 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 CICP17-201ENST00000418553 2377 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 KLF2P1-201ENST00000447438 1042 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.3■□□□□ 0.04
CAPN9O14815 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN9O14815 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.3■□□□□ 0.04
CAPN9O14815 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN9O14815 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CAPN9O14815 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.3■□□□□ 0.04
CAPN9O14815 SORD2P-201ENST00000558556 1069 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPN9O14815 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 AC005962.1-201ENST00000584100 773 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 AC244093.1-201ENST00000610837 814 ntBASIC15.3■□□□□ 0.04
CAPN9O14815 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CAPN9O14815 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.3■□□□□ 0.04
CAPN9O14815 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPN9O14815 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms