Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MBLAC2-201ENST00000316610 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 TSPY14P-201ENST00000303979 915 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MIR662-201ENST00000384847 95 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AP002469.2-201ENST00000531724 424 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 SPIB-206ENST00000596074 847 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC026471.5-201ENST00000615068 467 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 REXO1L3P-201ENST00000622202 1288 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC073648.6-201ENST00000641589 218 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 UBC-206ENST00000538617 1303 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC092447.8-201ENST00000566570 4162 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NCF1C-201ENST00000438382 1427 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 PMPCAP1-201ENST00000508114 1576 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC007787.1-201ENST00000588095 1583 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AC006504.4-201ENST00000592118 1568 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MVK-214ENST00000629016 1591 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AL139274.2-201ENST00000606274 4127 ntBASIC7.91□□□□□ -1.14
CHKB-CPT1BH3BT56 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms