Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC139713.2-207ENST00000641556 1292 ntBASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 AC067931.2-201ENST00000623655 2003 ntBASIC17.21■□□□□ 0.35
ZC3H4Q9UPT8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 IFNWP2-201ENST00000431203 580 ntBASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AL773545.2-201ENST00000442149 472 ntBASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 RHOQP2-201ENST00000449922 579 ntBASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.21■□□□□ 0.34
ZC3H4Q9UPT8 AC020931.1-201ENST00000589622 1346 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 LINC01101-201ENST00000622953 1884 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 NFIC-211ENST00000641145 8399 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 HNRNPA1P25-201ENST00000422644 937 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 AC108724.1-201ENST00000481669 352 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 AC093300.1-201ENST00000510368 1201 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 EEF1DP7-201ENST00000580496 513 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 RN7SL556P-201ENST00000582856 298 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 AC020922.4-201ENST00000621389 339 ntBASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZC3H4Q9UPT8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms