Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 VDAC1P1-201ENST00000439229 848 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC006335.1-201ENST00000445200 547 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AL133499.1-201ENST00000596207 608 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC136759.1-202ENST00000530858 2194 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 SNX18-202ENST00000343017 3140 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 CICP12-201ENST00000455801 843 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AC009779.1-201ENST00000551138 283 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AC020922.3-201ENST00000595064 547 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AP001267.2-201ENST00000532619 2086 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 AC092135.3-201ENST00000624151 1846 ntBASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA1Q9UND3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA1Q9UND3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms