Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AC027601.3-201ENST00000622907 509 ntBASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AC072061.1-201ENST00000569710 2234 ntBASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 NUTM2HP-201ENST00000442076 2498 ntBASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC106760.1-201ENST00000508690 800 ntBASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 OR10B1P-201ENST00000601666 907 ntBASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AL022328.1-201ENST00000610050 478 ntBASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 RPSAP52-203ENST00000622976 1023 ntBASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
THUMPD1Q9NXG2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC009093.2-202ENST00000620513 2079 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms