Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AC026434.2-201ENST00000506094 1078 ntBASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AC131206.1-201ENST00000538078 1211 ntBASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 AL583810.1-201ENST00000553344 1045 ntBASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 SORD2P-201ENST00000558556 1069 ntBASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCM2LQ9NUG4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC026410.3-201ENST00000514280 936 ntBASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC103988.2-201ENST00000561804 725 ntBASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AC010319.3-201ENST00000597028 470 ntBASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 MIR8072-201ENST00000614241 80 ntBASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCM2LQ9NUG4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms