Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC025279.1-201ENST00000604430 4818 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 BID-214ENST00000617586 542 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 POMGNT1-202ENST00000371992 2934 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 UGT1A7-201ENST00000373426 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 HKDC1-201ENST00000354624 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CD300LF-201ENST00000301573 1785 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CD300LF-202ENST00000326165 1764 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC108024.1-201ENST00000626286 1721 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 SULF1-223ENST00000616868 3381 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 NEFL-204ENST00000639464 3205 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC084364.1-201ENST00000551967 1556 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TCTE1-202ENST00000371505 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 DCK-204ENST00000504952 2614 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC004951.3-201ENST00000418645 1148 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TRMT112P6-201ENST00000599234 372 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AL512631.2-201ENST00000604634 923 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AL441943.2-201ENST00000421077 2321 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms