Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 BRWD1P1-201ENST00000401091 371 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 C2orf69P2-201ENST00000562032 1123 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 PPY2P-201ENST00000582808 702 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 AL136301.1-201ENST00000615830 422 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 RHOXF1P1-202ENST00000635473 501 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MIR326-201ENST00000362220 95 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 BNIP3P42-201ENST00000454982 569 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 SNX29P1-201ENST00000548357 1007 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MIR4538-201ENST00000581377 78 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 BNIP3P29-201ENST00000598302 571 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AC011447.5-201ENST00000616168 564 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 CICP4-201ENST00000447359 2812 ntBASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NEUROD4Q9HD90 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms