Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 BCYRN1-201ENST00000418539 200 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 AKR7A2P1-201ENST00000460134 915 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF183Q96D59 SERPINA13P-202ENST00000478994 924 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 SCARNA20.5-201ENST00000516991 142 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.83□□□□□ -0.68
RNF183Q96D59 AL606495.2-201ENST00000605867 535 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
RNF183Q96D59 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 AC106818.1-201ENST00000623223 3242 ntBASIC10.83□□□□□ -0.68
RNF183Q96D59 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF183Q96D59 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
RNF183Q96D59 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.83□□□□□ -0.68
RNF183Q96D59 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RNF183Q96D59 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
RNF183Q96D59 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF183Q96D59 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 SALL4P5-201ENST00000419001 1760 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 AC003102.2-201ENST00000589195 1469 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 SHC1P1-201ENST00000425230 1745 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RNF183Q96D59 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RNF183Q96D59 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 CALR4P-201ENST00000431943 946 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 FAM58BP-201ENST00000439056 645 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 TUBB8P8-201ENST00000458717 1058 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.82□□□□□ -0.68
RNF183Q96D59 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RNF183Q96D59 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 SNX12-206ENST00000622259 661 ntTSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 AL139099.5-201ENST00000635274 300 ntBASIC10.82□□□□□ -0.68
RNF183Q96D59 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF183Q96D59 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF183Q96D59 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.82□□□□□ -0.68
RNF183Q96D59 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms