Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 BX284668.4-201ENST00000453917 508 ntBASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 AC134698.3-201ENST00000523880 214 ntBASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 IQSEC3P1-201ENST00000538799 536 ntBASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.65□□□□□ -0.06
SHROOM3Q8TF72 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SHROOM3Q8TF72 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 PDIA3P2-201ENST00000428073 158 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SCARNA21-201ENST00000517026 139 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AP000346.4-201ENST00000614827 381 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AP001505.2-201ENST00000616815 443 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AGAP10P-201ENST00000454844 2418 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC089987.1-201ENST00000551654 2209 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC126915.1-201ENST00000522847 1038 ntBASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.64□□□□□ -0.07
SHROOM3Q8TF72 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 AC010327.5-201ENST00000586923 3061 ntBASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 AL365181.3-201ENST00000605886 3222 ntBASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHROOM3Q8TF72 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms