Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 SHC1P1-201ENST00000425230 1745 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 KRT8P24-201ENST00000560290 1559 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 RPL7P3-201ENST00000441388 714 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 CROCCP4-201ENST00000457096 498 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 CR383656.12-201ENST00000549567 513 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AC012645.4-201ENST00000610691 1061 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 MIR326-201ENST00000362220 95 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AL035633.1-201ENST00000406139 838 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 KLF2P4-201ENST00000451959 1225 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AP000812.2-201ENST00000538934 718 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AC079316.1-201ENST00000548397 411 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AC023310.1-201ENST00000554836 735 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 AP006547.1-201ENST00000563435 692 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 TUBB8P4-201ENST00000511806 1324 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 C8orf49-201ENST00000525043 1968 ntBASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms