Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AL353779.1-201ENST00000434793 351 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 FAM58CP-201ENST00000435741 640 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AL592309.1-201ENST00000443127 649 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 EMBP1-201ENST00000458200 901 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 GATB-205ENST00000508611 605 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ALG1L8P-201ENST00000533887 760 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AL079307.3-201ENST00000556114 283 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AL033527.5-202ENST00000641632 1098 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AC092902.6-201ENST00000641783 218 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ABCD1P2-201ENST00000429313 1601 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 AP003969.2-201ENST00000623739 2275 ntBASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMIM11BQ8TCY0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 AC003102.2-201ENST00000589195 1469 ntBASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 PI4KAP2-201ENST00000360806 2080 ntBASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMIM11BQ8TCY0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AL022313.4-201ENST00000562756 2046 ntBASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms