Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 NME1-209ENST00000511355 1645 ntTSL 5 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AL513477.1-201ENST00000602865 2407 ntBASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC026271.1-201ENST00000447794 1348 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC005077.3-201ENST00000449614 213 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 ALG10-202ENST00000538927 571 ntTSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AL136298.3-201ENST00000556746 445 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AL139317.2-201ENST00000556998 158 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC245369.8-201ENST00000636589 306 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC079328.2-201ENST00000561241 3354 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC034205.3-201ENST00000603595 1376 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 TUBB8P4-201ENST00000511806 1324 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 RPL35P1-201ENST00000450819 370 ntBASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL22A1Q8NFW1 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 FAM86FP-201ENST00000338711 969 ntBASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 RNA5SP84-201ENST00000364740 107 ntBASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 Z84721.1-201ENST00000438841 372 ntBASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AC015818.3-201ENST00000583797 589 ntBASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL22A1Q8NFW1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms