Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC005695.3-201ENST00000614522 232 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 KRT8P29-201ENST00000420409 1371 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 REXO1L6P-201ENST00000603433 1515 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC016397.2-201ENST00000624848 1985 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 MIR1908-201ENST00000410394 80 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 RN7SL219P-201ENST00000582872 296 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC005324.6-201ENST00000587972 613 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC136759.1-202ENST00000530858 2194 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 AC144522.1-201ENST00000625111 1658 ntBASIC12.67□□□□□ -0.38
CPEB3Q8NE35 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPEB3Q8NE35 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPEB3Q8NE35 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.66□□□□□ -0.38
CPEB3Q8NE35 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPEB3Q8NE35 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms