Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 VDAC1P1-201ENST00000439229 848 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 SPTLC1P5-201ENST00000450718 252 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AC006122.1-201ENST00000493323 440 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 HLA-J-204ENST00000495278 958 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AL132994.2-201ENST00000603120 687 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AL645939.5-201ENST00000606834 243 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AC144522.1-201ENST00000625111 1658 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AL157791.1-201ENST00000553667 1699 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TUBBP5-203ENST00000508529 1334 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AL662890.1-201ENST00000396818 632 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AL133466.1-201ENST00000447582 150 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC103988.2-201ENST00000561804 725 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC006504.5-208ENST00000588784 2401 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms