Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM5Q71RC9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SMIM5Q71RC9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.86■□□□□ 0.45
SMIM5Q71RC9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SMIM5Q71RC9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM5Q71RC9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 RN7SL351P-201ENST00000469306 248 ntBASIC17.85■□□□□ 0.45
SMIM5Q71RC9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.85■□□□□ 0.45
SMIM5Q71RC9 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 AC120498.7-201ENST00000562876 330 ntBASIC17.85■□□□□ 0.45
SMIM5Q71RC9 AC007952.5-201ENST00000572818 1486 ntBASIC17.85■□□□□ 0.45
SMIM5Q71RC9 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 URAHP-205ENST00000610227 398 ntBASIC17.85■□□□□ 0.45
SMIM5Q71RC9 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM5Q71RC9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AC113347.2-201ENST00000512350 279 ntBASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM5Q71RC9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.83■□□□□ 0.45
SMIM5Q71RC9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM5Q71RC9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms