Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 AC140479.7-201ENST00000636301 2332 ntBASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 CDK4P1-201ENST00000454213 828 ntBASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 RN7SL523P-201ENST00000484401 298 ntBASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 CCND3P2-201ENST00000579393 537 ntBASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42BPAQ5VT25 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 MIR2278-201ENST00000516344 96 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 AP000920.1-201ENST00000531824 344 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 MIR5091-201ENST00000578707 93 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 BX640514.1-201ENST00000583223 1918 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 BCL2L12P1-201ENST00000508390 733 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 AC080013.5-201ENST00000607044 679 ntBASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDC42BPAQ5VT25 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 GOLGA8VP-201ENST00000559009 1798 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 KRT8P30-201ENST00000432100 650 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 OR4A49P-201ENST00000527050 632 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 ACY3-202ENST00000529256 933 ntTSL 3 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 PRR20FP-201ENST00000603320 180 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 AL357143.1-203ENST00000639750 881 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 TNRC18P2-201ENST00000417666 2714 ntBASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42BPAQ5VT25 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 AC004923.3-201ENST00000527532 355 ntBASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 MIR4254-201ENST00000581063 76 ntBASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 AC016582.2-202ENST00000587765 1094 ntBASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms