Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 HYMAI-201ENST00000635591 3347 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 U3.5-201ENST00000363448 216 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AL157823.1-201ENST00000403727 628 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AC023141.7-201ENST00000430646 407 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AC027612.2-202ENST00000445955 1199 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 TBC1D3P6-201ENST00000505954 962 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 MIR4746-201ENST00000579802 71 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CSTP2-201ENST00000610599 398 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 AC011462.4-201ENST00000616866 449 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 PES1P2-201ENST00000449745 1735 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 PAUPAR-201ENST00000630360 2965 ntBASIC17.74■□□□□ 0.43
RC3H1Q5TC82 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RC3H1Q5TC82 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 AC090505.1-201ENST00000430515 1834 ntBASIC17.73■□□□□ 0.43
RC3H1Q5TC82 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 ZNF877P-201ENST00000437614 612 ntBASIC17.73■□□□□ 0.43
RC3H1Q5TC82 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MIR2278-201ENST00000516344 96 ntBASIC17.73■□□□□ 0.43
RC3H1Q5TC82 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 AC008536.3-201ENST00000623282 1599 ntBASIC17.73■□□□□ 0.43
RC3H1Q5TC82 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.73■□□□□ 0.43
RC3H1Q5TC82 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 TCAF2P1-201ENST00000291129 2421 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC068760.1-201ENST00000493579 1953 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms