Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HERC4Q5GLZ8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 CICP16-201ENST00000502609 2813 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC016397.2-201ENST00000624848 1985 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC016700.1-201ENST00000429424 312 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC114501.1-201ENST00000445949 172 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC005586.2-201ENST00000563946 837 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 MIR3907-201ENST00000579424 151 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 MIR6720-201ENST00000611664 98 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AP003419.4-201ENST00000616071 517 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 TMBIM7P-202ENST00000641474 1516 ntBASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC4Q5GLZ8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AL157407.1-201ENST00000435784 904 ntBASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AC100827.2-201ENST00000563214 1194 ntBASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AC138649.2-201ENST00000615886 705 ntBASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HERC4Q5GLZ8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms