Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PER3P56645 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.5□□□□□ -0.25
PER3P56645 AC012618.1-201ENST00000461223 412 ntBASIC13.5□□□□□ -0.25
PER3P56645 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.5□□□□□ -0.25
PER3P56645 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.5□□□□□ -0.25
PER3P56645 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.49□□□□□ -0.25
PER3P56645 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 HIST2H2BB-201ENST00000449108 381 ntBASIC13.49□□□□□ -0.25
PER3P56645 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 IQSEC3P1-201ENST00000538799 536 ntBASIC13.49□□□□□ -0.25
PER3P56645 AC005730.2-201ENST00000564549 1184 ntBASIC13.49□□□□□ -0.25
PER3P56645 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 AC073413.1-201ENST00000603927 732 ntBASIC13.49□□□□□ -0.25
PER3P56645 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.49□□□□□ -0.25
PER3P56645 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 AC087386.2-201ENST00000623212 4637 ntBASIC13.49□□□□□ -0.25
PER3P56645 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.49□□□□□ -0.25
PER3P56645 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PER3P56645 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PER3P56645 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PER3P56645 AC092135.3-201ENST00000624151 1846 ntBASIC13.48□□□□□ -0.25
PER3P56645 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PER3P56645 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.48□□□□□ -0.25
PER3P56645 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PER3P56645 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms