Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDH6P55285 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.04■□□□□ -0
CDH6P55285 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH6P55285 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH6P55285 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 REXO1L6P-201ENST00000603433 1515 ntBASIC15.04■□□□□ -0
CDH6P55285 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.04■□□□□ -0
CDH6P55285 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH6P55285 AL354877.1-201ENST00000424412 413 ntBASIC15.04■□□□□ -0
CDH6P55285 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.04■□□□□ -0
CDH6P55285 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.04■□□□□ -0
CDH6P55285 RNA5SP412-201ENST00000516234 123 ntBASIC15.04■□□□□ -0
CDH6P55285 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.04■□□□□ -0
CDH6P55285 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.04■□□□□ -0
CDH6P55285 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH6P55285 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDH6P55285 AL162426.1-201ENST00000624141 743 ntBASIC15.04■□□□□ -0
CDH6P55285 Z98259.2-201ENST00000641583 609 ntBASIC15.04■□□□□ -0
CDH6P55285 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.04■□□□□ -0
CDH6P55285 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.04■□□□□ -0
CDH6P55285 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
CDH6P55285 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH6P55285 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.03■□□□□ -0
CDH6P55285 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH6P55285 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.03■□□□□ -0
CDH6P55285 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH6P55285 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 USP17L6P-201ENST00000382470 1197 ntBASIC15.03■□□□□ -0
CDH6P55285 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.03■□□□□ -0
CDH6P55285 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.03■□□□□ -0
CDH6P55285 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.03■□□□□ -0
CDH6P55285 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.03■□□□□ -0
CDH6P55285 MIR4259-201ENST00000584466 101 ntBASIC15.03■□□□□ -0
CDH6P55285 AC010328.2-201ENST00000597698 1111 ntBASIC15.03■□□□□ -0
CDH6P55285 AC009884.2-201ENST00000603110 324 ntBASIC15.03■□□□□ -0
CDH6P55285 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.03■□□□□ -0
CDH6P55285 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH6P55285 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CDH6P55285 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH6P55285 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.03■□□□□ -0
CDH6P55285 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH6P55285 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CDH6P55285 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.02■□□□□ -0
CDH6P55285 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH6P55285 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH6P55285 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH6P55285 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH6P55285 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.02■□□□□ -0
CDH6P55285 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH6P55285 AC111170.3-201ENST00000624282 2464 ntBASIC15.02■□□□□ -0
CDH6P55285 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.02■□□□□ -0
CDH6P55285 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDH6P55285 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.02■□□□□ -0
CDH6P55285 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH6P55285 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH6P55285 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH6P55285 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms