Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PMS1P54277 AC079316.1-201ENST00000548397 411 ntBASIC15.86■□□□□ 0.13
PMS1P54277 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 AL160314.3-201ENST00000556041 767 ntBASIC15.86■□□□□ 0.13
PMS1P54277 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.86■□□□□ 0.13
PMS1P54277 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 AC073548.1-201ENST00000624088 1882 ntBASIC15.86■□□□□ 0.13
PMS1P54277 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 AC144522.1-201ENST00000625111 1658 ntBASIC15.86■□□□□ 0.13
PMS1P54277 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.85■□□□□ 0.13
PMS1P54277 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
PMS1P54277 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 AL354877.1-201ENST00000424412 413 ntBASIC15.85■□□□□ 0.13
PMS1P54277 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.85■□□□□ 0.13
PMS1P54277 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.85■□□□□ 0.13
PMS1P54277 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 MIR4259-201ENST00000584466 101 ntBASIC15.85■□□□□ 0.13
PMS1P54277 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 AC244157.2-201ENST00000616239 1006 ntBASIC15.85■□□□□ 0.13
PMS1P54277 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMS1P54277 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.85■□□□□ 0.13
PMS1P54277 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 CCT8L1P-201ENST00000465400 1674 ntBASIC15.84■□□□□ 0.13
PMS1P54277 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.84■□□□□ 0.13
PMS1P54277 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.84■□□□□ 0.13
PMS1P54277 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 ACA64.2-201ENST00000459014 129 ntBASIC15.84■□□□□ 0.13
PMS1P54277 AC006122.1-201ENST00000493323 440 ntBASIC15.84■□□□□ 0.13
PMS1P54277 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.84■□□□□ 0.13
PMS1P54277 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.84■□□□□ 0.13
PMS1P54277 AC100827.2-201ENST00000563214 1194 ntBASIC15.84■□□□□ 0.13
PMS1P54277 AC124068.2-201ENST00000569473 1109 ntBASIC15.84■□□□□ 0.13
PMS1P54277 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms