Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.04■□□□□ 0.8
HDGFP51858 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC20.04■□□□□ 0.8
HDGFP51858 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.04■□□□□ 0.8
HDGFP51858 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.04■□□□□ 0.8
HDGFP51858 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.04■□□□□ 0.8
HDGFP51858 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.04■□□□□ 0.8
HDGFP51858 AL590235.1-201ENST00000564650 861 ntBASIC20.04■□□□□ 0.8
HDGFP51858 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.04■□□□□ 0.8
HDGFP51858 CSTP2-201ENST00000610599 398 ntBASIC20.04■□□□□ 0.8
HDGFP51858 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.04■□□□□ 0.8
HDGFP51858 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.04■□□□□ 0.8
HDGFP51858 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.04■□□□□ 0.8
HDGFP51858 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDGFP51858 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 AC092115.1-201ENST00000566277 1402 ntBASIC20.03■□□□□ 0.8
HDGFP51858 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 FLJ16779-201ENST00000612722 7638 ntBASIC20.03■□□□□ 0.8
HDGFP51858 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HDGFP51858 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HDGFP51858 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.03■□□□□ 0.8
HDGFP51858 RN7SL351P-201ENST00000469306 248 ntBASIC20.03■□□□□ 0.8
HDGFP51858 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.03■□□□□ 0.8
HDGFP51858 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC20.03■□□□□ 0.8
HDGFP51858 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.03■□□□□ 0.8
HDGFP51858 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HDGFP51858 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.03■□□□□ 0.8
HDGFP51858 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
HDGFP51858 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.03■□□□□ 0.8
HDGFP51858 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 AC018529.2-202ENST00000611482 3087 ntBASIC20.03■□□□□ 0.8
HDGFP51858 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDGFP51858 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HDGFP51858 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HDGFP51858 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 AC092896.1-201ENST00000465850 380 ntBASIC20.02■□□□□ 0.8
HDGFP51858 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.02■□□□□ 0.8
HDGFP51858 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.02■□□□□ 0.8
HDGFP51858 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.02■□□□□ 0.8
HDGFP51858 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC20.02■□□□□ 0.8
HDGFP51858 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 AC139713.2-207ENST00000641556 1292 ntBASIC20.02■□□□□ 0.8
HDGFP51858 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC20.02■□□□□ 0.8
HDGFP51858 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.02■□□□□ 0.8
HDGFP51858 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDGFP51858 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.79
HDGFP51858 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HDGFP51858 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HDGFP51858 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.02■□□□□ 0.79
HDGFP51858 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC20.02■□□□□ 0.79
HDGFP51858 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HDGFP51858 AC232323.1-201ENST00000540724 2099 ntBASIC20.01■□□□□ 0.79
HDGFP51858 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDGFP51858 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDGFP51858 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC20.01■□□□□ 0.79
HDGFP51858 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms