Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.23□□□□□ -0.29
CENPAP49450 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CENPAP49450 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.22□□□□□ -0.29
CENPAP49450 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 AL138725.1-201ENST00000407347 1314 ntBASIC13.22□□□□□ -0.29
CENPAP49450 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.22□□□□□ -0.29
CENPAP49450 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 AC041040.2-201ENST00000622926 2899 ntBASIC13.22□□□□□ -0.29
CENPAP49450 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CENPAP49450 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.22□□□□□ -0.29
CENPAP49450 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.22□□□□□ -0.29
CENPAP49450 TDH-203ENST00000531764 1110 ntBASIC13.22□□□□□ -0.29
CENPAP49450 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 AC190387.1-201ENST00000551683 408 ntBASIC13.22□□□□□ -0.29
CENPAP49450 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 AC215219.1-201ENST00000400706 1817 ntBASIC13.22□□□□□ -0.29
CENPAP49450 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.22□□□□□ -0.29
CENPAP49450 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CENPAP49450 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CENPAP49450 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CENPAP49450 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
CENPAP49450 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 AC134312.5-201ENST00000568031 1313 ntBASIC13.21□□□□□ -0.29
CENPAP49450 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 MIR661-201ENST00000384842 89 ntBASIC13.21□□□□□ -0.29
CENPAP49450 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.21□□□□□ -0.29
CENPAP49450 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms