Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A2P43354 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A2P43354 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A2P43354 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A2P43354 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A2P43354 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 AC016397.2-201ENST00000624848 1985 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NR4A2P43354 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NR4A2P43354 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 AC074338.1-201ENST00000416825 156 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 FAM86LP-201ENST00000478302 853 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A2P43354 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NR4A2P43354 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A2P43354 CU634019.7-201ENST00000624153 1185 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 FP236241.2-201ENST00000624906 1185 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.24□□□□□ -0.29
NR4A2P43354 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A2P43354 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A2P43354 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A2P43354 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NR4A2P43354 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NR4A2P43354 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
NR4A2P43354 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A2P43354 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A2P43354 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A2P43354 AC022447.6-201ENST00000515522 438 ntBASIC13.23□□□□□ -0.29
NR4A2P43354 AC104989.1-201ENST00000519711 778 ntBASIC13.23□□□□□ -0.29
NR4A2P43354 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A2P43354 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
NR4A2P43354 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 AC233724.13-201ENST00000598383 410 ntBASIC13.23□□□□□ -0.29
NR4A2P43354 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A2P43354 MIR6775-201ENST00000617557 69 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms