Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RFC1P35251 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RFC1P35251 AC090643.2-201ENST00000623442 2029 ntBASIC15.25■□□□□ 0.03
RFC1P35251 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.24■□□□□ 0.03
RFC1P35251 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RFC1P35251 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 KRT8P24-201ENST00000560290 1559 ntBASIC15.24■□□□□ 0.03
RFC1P35251 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 REXO1L6P-201ENST00000603433 1515 ntBASIC15.24■□□□□ 0.03
RFC1P35251 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 FAM21FP-201ENST00000426241 1131 ntBASIC15.24■□□□□ 0.03
RFC1P35251 ATP5G2P4-201ENST00000442175 420 ntBASIC15.24■□□□□ 0.03
RFC1P35251 RPSAP36-202ENST00000494591 1261 ntBASIC15.24■□□□□ 0.03
RFC1P35251 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.24■□□□□ 0.03
RFC1P35251 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RFC1P35251 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.24■□□□□ 0.03
RFC1P35251 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFC1P35251 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.24■□□□□ 0.03
RFC1P35251 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFC1P35251 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFC1P35251 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFC1P35251 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFC1P35251 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 TUBB8P4-201ENST00000511806 1324 ntBASIC15.23■□□□□ 0.03
RFC1P35251 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFC1P35251 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.23■□□□□ 0.03
RFC1P35251 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.23■□□□□ 0.03
RFC1P35251 ST13P19-201ENST00000442505 1124 ntBASIC15.23■□□□□ 0.03
RFC1P35251 HSPB1P2-201ENST00000448722 546 ntBASIC15.23■□□□□ 0.03
RFC1P35251 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.23■□□□□ 0.03
RFC1P35251 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFC1P35251 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms