Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.7■□□□□ 0.26
COL4A5P29400 MIR6125-201ENST00000618986 96 ntBASIC16.7■□□□□ 0.26
COL4A5P29400 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.7■□□□□ 0.26
COL4A5P29400 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.7■□□□□ 0.26
COL4A5P29400 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A5P29400 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL4A5P29400 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A5P29400 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
COL4A5P29400 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
COL4A5P29400 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL4A5P29400 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A5P29400 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL4A5P29400 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16.69■□□□□ 0.26
COL4A5P29400 PEBP1P3-201ENST00000455475 548 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.69■□□□□ 0.26
COL4A5P29400 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 OR4A49P-201ENST00000527050 632 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 AC138627.1-201ENST00000641127 1257 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 AL590824.1-201ENST00000403828 1349 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 OLA1P2-201ENST00000395519 1264 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 OR7E155P-201ENST00000412208 1014 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 OR4C14P-201ENST00000440929 923 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A5P29400 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A5P29400 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A5P29400 AC106782.5-201ENST00000616011 337 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A5P29400 NF1P11-201ENST00000621292 1282 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 MEP1AP1-201ENST00000636082 1097 ntBASIC16.69■□□□□ 0.26
COL4A5P29400 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL4A5P29400 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.68■□□□□ 0.26
COL4A5P29400 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.68■□□□□ 0.26
COL4A5P29400 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.68■□□□□ 0.26
COL4A5P29400 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A5P29400 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A5P29400 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms