Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AC015818.8-201ENST00000587907 1519 ntBASIC13.3□□□□□ -0.28
SHC1P29353 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 MIR1908-201ENST00000410394 80 ntBASIC13.3□□□□□ -0.28
SHC1P29353 AC010141.1-201ENST00000411585 623 ntBASIC13.3□□□□□ -0.28
SHC1P29353 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AC079178.1-201ENST00000420915 656 ntBASIC13.3□□□□□ -0.28
SHC1P29353 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 MTX1P1-201ENST00000440904 838 ntBASIC13.3□□□□□ -0.28
SHC1P29353 AC244107.1-201ENST00000442033 332 ntBASIC13.3□□□□□ -0.28
SHC1P29353 Z93015.1-201ENST00000451718 390 ntBASIC13.3□□□□□ -0.28
SHC1P29353 CICP12-201ENST00000455801 843 ntBASIC13.3□□□□□ -0.28
SHC1P29353 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.3□□□□□ -0.28
SHC1P29353 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.3□□□□□ -0.28
SHC1P29353 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AC015688.4-201ENST00000580780 1647 ntBASIC13.3□□□□□ -0.28
SHC1P29353 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
SHC1P29353 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 TUBB1P2-201ENST00000422712 1306 ntBASIC13.3□□□□□ -0.28
SHC1P29353 TUBB1P1-201ENST00000503144 1300 ntBASIC13.3□□□□□ -0.28
SHC1P29353 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SHC1P29353 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AGGF1P1-201ENST00000509500 2073 ntBASIC13.3□□□□□ -0.28
SHC1P29353 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 AC012617.1-204ENST00000586340 2305 ntBASIC13.29□□□□□ -0.28
SHC1P29353 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.29□□□□□ -0.28
SHC1P29353 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
SHC1P29353 HSPB1P2-201ENST00000448722 546 ntBASIC13.29□□□□□ -0.28
SHC1P29353 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.29□□□□□ -0.28
SHC1P29353 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 AC103988.2-201ENST00000561804 725 ntBASIC13.29□□□□□ -0.28
SHC1P29353 AC005730.2-201ENST00000564549 1184 ntBASIC13.29□□□□□ -0.28
SHC1P29353 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.29□□□□□ -0.28
SHC1P29353 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 AL096828.3-201ENST00000615354 462 ntBASIC13.29□□□□□ -0.28
SHC1P29353 AC244157.2-201ENST00000616239 1006 ntBASIC13.29□□□□□ -0.28
SHC1P29353 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.29□□□□□ -0.28
SHC1P29353 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.29□□□□□ -0.28
SHC1P29353 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.29□□□□□ -0.28
SHC1P29353 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHC1P29353 AC027612.1-201ENST00000445234 2395 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms